Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891966.1_cds_XP_016446866.1_41681
CDS Infomation

[gene=LOC107771918] [db_xref=GeneID:107771918] [protein=protein TIC 55, chloroplastic-like] [protein_id=XP_016446866.1] [location=join(50857..51293,53907..54009,54097..55230)] [gbkey=CDS]
Sequence

ATGGCTTTACAGCAACCATTTCTCTCTGAGTTACTCCACTTAACTTCAAAGAGGTCACTG
CCAATTACATTGACCACAAGAAGTACTATTCTTTCTCTACATCTACCTCAAAAACACAAT
CTTTATCTTCACAACAAGCAGTTGAAGAAACAGGAGAGAATAAGTTGTTATGCAATTGCA
GAGAATATTGGGGGTGGGATCTCTTCATCTGAAAATGATGATCAAAGTGTGCTTTTGGAA
AATTCAAGCTTAGAGGAATTGAGGGGACAAAGGGAAATTGTTGGTTATGATTGGACAGAA
GAGTGGTATCCTCTGTATTTGACCAAGAATGTTCCTGATGATGCACCTTTGGGTCTCACT
GTCTTTGATAAACAAGTTGTTTTGTACAAGGATGGCAGTGGTGAACTCAGATGCTTTGAA
GATCGATGTCCACATAGATTAGCCAAACTCTCTGAAGGACAACTGTACGACGGCAAACTG
GAATGCTTATATCATGGTTGGCAGTTTGAAGGAGATGGTAAATGTGTGAAGATACCACAG
CTACCTGAAAATGCTAGAATTCCTCGATCAGCTTGTGCTAAGAAATATGAAATTAGGGAT
TCCCAGGGAGTAGTTTGGATATGGATGTCTCAAAGAACACCACCTAATATCAACAAAATC
CCCTGGTTTGAAAACTTTGAAAGGGAAGGATTTCGAGACATTTCTACAACTCACGAGCTC
CCTTATGACCACTCTATTCTTCTGGAAAACCTCATGGACCCAGCTCATGTCCCGATATCA
CACGATAGAACAGATTTTACAGCAAAAAGGGAAGATGCTGGACCACTATTTTTCGAGGTA
ACAGAAAGGACTAACCGGGGGTTCGCAGGATGGTGGGGCAAGGAAAAAGATCAAGGCAAA
GCAAACTATACGCCGAACTTCCTACGTTTTGAAGCTCCTTGTGTTCTTCATAATAGCAGA
GAAATTGTTGATGAGAATGGGGAGAAGCATTACTTTTCAGGTCTATTTCTTTGTAGGCCA
TCTGGTCAGGGAAAATCCATGCTTATTGTCCGGTTCGGAAACACAAGAAAAAGAACTGGG
ATACTTAAATTTATCCCAAACTGGTTCTTGCATCAGAATGCAGGCAAGGTTTTTGAGCAA
GATATGGGGTTCCTTTCGTCCCAAAACGAAATCCTAATGAAAGAAAAGGTTCCCACTAAG
AAATTGTACTTGAATCTAAAGTCGTCGGATACATGGGTAGCTGAATACAGGAAGTGGATG
GACAAAGTTGGACATGGAATGCCTTATCATTTTGGTCACAGCACCATTTACCTGCCCCAA
CAACCTGCTGTTGTCGAGCACGCCCCTGCTGGTTTCGTTGCCAATTTTTCGGCAGCTCAG
CCAGCTAAGGGAGGAATCGGTGGAATGTATGCTCCGAATCCCGCCAACAGATATTTCAGG
CATGTAGTCCATTGCAAGGATTGCAGAAATGTAGTTAAAGCTTTTGAGACTTGGAAAAAA
GCTCTCTCTTTTGTAGCTGTAGTGTCAACTGCATTGGCAATTCTAGTGTCAGGAAGACAG
TGGAAGGCCCTACTTTTGCTTTCAACATCACTATGTTTGGCTGGAATATATGCCTGCTCA
ACAGCCATTGCTATGAATACAACCAACTTCATAAGGATTCATAGAAGATTGTAA

Peptide Sequence

PEP ID

XP_016446866.1
PEP Infomation

PREDICTED: protein TIC 55, chloroplastic-like [Nicotiana tabacum]
Sequence

MALQQPFLSELLHLTSKRSLPITLTTRSTILSLHLPQKHNLYLHNKQLKKQERISCYAIA
ENIGGGISSSENDDQSVLLENSSLEELRGQREIVGYDWTEEWYPLYLTKNVPDDAPLGLT
VFDKQVVLYKDGSGELRCFEDRCPHRLAKLSEGQLYDGKLECLYHGWQFEGDGKCVKIPQ
LPENARIPRSACAKKYEIRDSQGVVWIWMSQRTPPNINKIPWFENFEREGFRDISTTHEL
PYDHSILLENLMDPAHVPISHDRTDFTAKREDAGPLFFEVTERTNRGFAGWWGKEKDQGK
ANYTPNFLRFEAPCVLHNSREIVDENGEKHYFSGLFLCRPSGQGKSMLIVRFGNTRKRTG
ILKFIPNWFLHQNAGKVFEQDMGFLSSQNEILMKEKVPTKKLYLNLKSSDTWVAEYRKWM
DKVGHGMPYHFGHSTIYLPQQPAVVEHAPAGFVANFSAAQPAKGGIGGMYAPNPANRYFR
HVVHCKDCRNVVKAFETWKKALSFVAVVSTALAILVSGRQWKALLLLSTSLCLAGIYACS
TAIAMNTTNFIRIHRRL

Transcript Sequence

Gene sequence data has not been registered.